Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907297.1_cds_XP_016457434.1_51159
CDS Infomation

[gene=LOC107781264] [db_xref=GeneID:107781264] [protein=probable 2-oxoglutarate-dependent dioxygenase AOP1 isoform X2] [protein_id=XP_016457434.1] [location=join(60806..60940,61058..61167,69802..70147,70609..70872)] [gbkey=CDS]
Sequence

ATGTCTCAAACACTTTCTAATGCTCCTATTATTGATCTCACCAAATTAGAGGATTCAAAT
TCTTGGCTAGAATTGTGCAATGACGTTCGTCATGCACTTGAAGATCATGGTTATTTTATA
TCACTTTATGATAAGCTTGAGGCAGCTCCTCTTCATGAAAGCTTTGGGATTGTATGTCCA
ACTGATATTCAAGCATTACAAACCTTCACCACACTCATGTGGCGACAAAGCAACGAAAGA
TTTAGTGAAACAGTAACATCGTACGTAAAGGCAGCAGCAGAACTAGAACAGTTGGTGGAC
AAAATGGTGTTCCAAAGCTATGGAGTAGCAGAAAGGCACTATGAATCTCATATAGCAGCC
ACTACATATCTCCTCCGTCCTACGAAGTATGCAACGCCACCACCGTCTGCAGACGATGAC
GGCGCAAATATTAATAACATAGGTGCAAATATACACACAGACAAGAGCTTCTCCACACTG
CTCTTTCAGAATCAGATTAATGGTTTGCAAGTTGAAAGTAAAAGTGGTGATTGGATTGCC
GTTGATGTCCCTCCTTCTGCATTCATCTTCATGGCTGGAGATGCTTATGAGGCATGGAGC
AATGGAAGAATATATGCACCGCGGCACCAAGTGTTGCTGAAAGAGGAAAAGCAAAGGTAC
ACATTGGCCCTGTTCACGTTTAACAAAGGAATAACAGATATACCTGAGGAATTAGTGGAT
GAAACACATCCTTTACAATACAAGCCTTTCGATAATTTTGGGCTAGCTTGGTACTACCTC
TCTGGTGCTAACTCCATGATTCACAGCACGGCTAAAGCTTACTGCGGCATCAATAATACT
GCATCCATCGCTTGA

Peptide Sequence

PEP ID

XP_016457434.1
PEP Infomation

PREDICTED: probable 2-oxoglutarate-dependent dioxygenase AOP1 isoform X2 [Nicotiana tabacum]
Sequence

MSQTLSNAPIIDLTKLEDSNSWLELCNDVRHALEDHGYFISLYDKLEAAPLHESFGIVCP
TDIQALQTFTTLMWRQSNERFSETVTSYVKAAAELEQLVDKMVFQSYGVAERHYESHIAA
TTYLLRPTKYATPPPSADDDGANINNIGANIHTDKSFSTLLFQNQINGLQVESKSGDWIA
VDVPPSAFIFMAGDAYEAWSNGRIYAPRHQVLLKEEKQRYTLALFTFNKGITDIPEELVD
ETHPLQYKPFDNFGLAWYYLSGANSMIHSTAKAYCGINNTASIA

Transcript Sequence

Gene sequence data has not been registered.